species:   Clros
pid:       PID1843
parent:    cro-mir-11
paralog:   
locus:     CADEHS020000485.2:10712-10778
matures:   ['UAGAGUUUUUGGAGAUGCU', 'UAUCACUACUCUAGC']
srr:       ERR5950923
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950923.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950923.cram CADEHS020000485.2:10712-10778

1 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

****************                              ******************** 
CUAUCACUACUCUAGCAUGGCCAAGUUAUAUACUUGACAAGCCCUUCUUAGAGUUUUUGGAGAUGCU
.((((.(((((((((...((((((((.....)))))....)))....)))))))....)).))))..
------------------------------------------------UAGAGUUUUUGGAGAUGCU l=19 a=0 c
-UAUCACUACUCUAGC--------------------------------------------------- l=15 a=0 c*
------------------------------------------------UAGAGUUUUUGGAGAUGC- l=18 a=1 ma
--AUCACUACUCUAGC--------------------------------------------------- l=14 a=0 ma*

------------------------------------------------UAGAGUUUUUGGAGAUGC- l=18 a=1 (ma)

mb-01011
ax-1011101
ku-01
ss-100011111010
fn-011
